Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9696_02784 | Not Available | Positive | 2893768 - 2894073 | 11063.1 |
| hypothetical protein | HMPREF9696_02785 | Not Available | Negative | 2894077 - 2895426 | 49696.3 |
| 3-dehydroquinate synthase | HMPREF9696_02786 | Not Available | Negative | 2895469 - 2896626 | 40481.8 |
| shikimate kinase | HMPREF9696_02787 | Not Available | Negative | 2896626 - 2897240 | 22149.5 |
| hypothetical protein | HMPREF9696_02788 | Not Available | Positive | 2897427 - 2897573 | 5350.79 |
| tyrosine recombinase xerd | HMPREF9696_02789 | Not Available | Positive | 2897587 - 2898546 | 35088.2 |
| acetyl-coenzyme a carboxylase carboxyl transferase subunit alpha | HMPREF9696_02790 | Not Available | Positive | 2898695 - 2899645 | 34220.9 |
| hypothetical protein | HMPREF9696_02791 | Not Available | Positive | 2900032 - 2901525 | 53013.5 |
| protein translocase subunit seca 1 | HMPREF9696_02792 | Not Available | Negative | 2901599 - 2904427 | 106259.0 |
| hypothetical protein | HMPREF9696_02793 | Not Available | Positive | 2904883 - 2905809 | 33167.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.