Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide deformylase | HMPREF9696_02685 | Not Available | Negative | 2786421 - 2786939 | 19609.9 |
| hypothetical protein | HMPREF9696_02686 | Not Available | Positive | 2787113 - 2788321 | 44766.1 |
| hypothetical protein | HMPREF9696_02687 | Not Available | Positive | 2788519 - 2789898 | 48692.6 |
| hypothetical protein | HMPREF9696_02688 | Not Available | Negative | 2789903 - 2790472 | 19586.7 |
| hypothetical protein | HMPREF9696_02689 | Not Available | Negative | 2790540 - 2790950 | 14484.7 |
| recombination protein recr | HMPREF9696_02690 | Not Available | Negative | 2790984 - 2791589 | 21593.1 |
| upf0133 protein | HMPREF9696_02691 | Not Available | Negative | 2791719 - 2792039 | 11140.8 |
| dna polymerase iii, subunit gamma and tau | HMPREF9696_02692 | Not Available | Negative | 2792111 - 2793976 | 66914.8 |
| hypothetical protein | HMPREF9696_02693 | Not Available | Negative | 2794168 - 2794305 | 4781.8 |
| hypothetical protein | HMPREF9696_02694 | Not Available | Positive | 2794392 - 2794811 | 15721.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.