Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtp-binding protein ysxc | HMPREF9696_02675 | Not Available | Positive | 2778092 - 2778790 | 25255.4 |
| hypothetical protein | HMPREF9696_02676 | Not Available | Positive | 2778790 - 2779173 | 12658.8 |
| acetylglutamate kinase | HMPREF9696_02677 | Not Available | Positive | 2779310 - 2780209 | 31574.6 |
| hypothetical protein | HMPREF9696_02678 | Not Available | Positive | 2780209 - 2781258 | 37380.4 |
| pyrimidine 5'-nucleotidase | HMPREF9696_02679 | Not Available | Positive | 2781255 - 2781953 | 26387.5 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | HMPREF9696_02680 | Not Available | Positive | 2782033 - 2782878 | 30161.2 |
| succinyl-diaminopimelate desuccinylase | HMPREF9696_02681 | Not Available | Positive | 2782888 - 2784042 | 41036.4 |
| hypothetical protein | HMPREF9696_02682 | Not Available | Positive | 2784039 - 2784614 | 20726.7 |
| trna pseudouridine synthase a | HMPREF9696_02683 | Not Available | Negative | 2784738 - 2785475 | 27239.3 |
| methionyl-trna formyltransferase | HMPREF9696_02684 | Not Available | Negative | 2785475 - 2786407 | 33095.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.