Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent zinc metalloprotease ftsh | HMPREF9696_02586 | Not Available | Negative | 2681699 - 2683615 | 69811.4 |
| trna(ile)-lysidine synthetase | HMPREF9696_02587 | Not Available | Negative | 2683822 - 2684871 | 37301.3 |
| tol-pal system protein ybgf | HMPREF9696_02588 | Not Available | Negative | 2685027 - 2686055 | 36514.7 |
| peptidoglycan-associated lipoprotein | HMPREF9696_02589 | Not Available | Negative | 2686272 - 2686763 | 17769.1 |
| hypothetical protein | HMPREF9696_02590 | Not Available | Negative | 2687016 - 2687768 | 28481.8 |
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9696_02591 | Not Available | Negative | 2687948 - 2690263 | 85056.9 |
| protein tolb | HMPREF9696_02592 | Not Available | Negative | 2690449 - 2691861 | 51430.0 |
| hypothetical protein | HMPREF9696_02593 | Not Available | Negative | 2691879 - 2692817 | 34261.1 |
| protein tolr | HMPREF9696_02594 | Not Available | Negative | 2692819 - 2693271 | 16057.9 |
| protein tolq | HMPREF9696_02595 | Not Available | Negative | 2693296 - 2694009 | 26045.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
