Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9696_02536 | Not Available | Positive | 2629217 - 2629636 | 15809.2 |
| dna mismatch repair protein mutl | HMPREF9696_02537 | Not Available | Positive | 2629728 - 2631545 | 65378.1 |
| hypothetical protein | HMPREF9696_02538 | Not Available | Negative | 2631528 - 2633285 | 63873.1 |
| nucleotide sugar dehydrogenase | HMPREF9696_02539 | Not Available | Negative | 2633341 - 2634621 | 45313.2 |
| rsmd family rna methyltransferase | HMPREF9696_02540 | Not Available | Negative | 2634726 - 2635280 | 20079.9 |
| pseudouridine synthase | HMPREF9696_02541 | Not Available | Negative | 2635417 - 2637510 | 78982.9 |
| hypothetical protein | HMPREF9696_02542 | Not Available | Positive | 2637670 - 2638116 | 15806.9 |
| hypothetical protein | HMPREF9696_02543 | Not Available | Negative | 2638113 - 2638562 | 16823.2 |
| fluoroacetate dehalogenase | HMPREF9696_02544 | Not Available | Negative | 2638563 - 2639471 | 33704.9 |
| phosphoribosylamine-glycine ligase | HMPREF9696_02545 | Not Available | Negative | 2639549 - 2640814 | 44741.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.