Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9696_02458 | Not Available | Positive | 2550556 - 2550831 | 10400.6 |
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9696_02459 | Not Available | Positive | 2551097 - 2553508 | 85660.7 |
| Trna-his | Not Available | Not Available | Positive | 2553535 - 2553611 | Not Available |
| phasin | HMPREF9696_02460 | Not Available | Negative | 2553792 - 2554217 | 15064.8 |
| phasin | HMPREF9696_02461 | Not Available | Negative | 2554410 - 2554784 | 13273.7 |
| pas domain s-box protein | HMPREF9696_02462 | Not Available | Positive | 2555096 - 2558581 | 123520.0 |
| hypothetical protein | HMPREF9696_02463 | Not Available | Positive | 2558710 - 2559732 | 36478.4 |
| hypothetical protein | HMPREF9696_02464 | Not Available | Positive | 2559761 - 2561404 | 58138.1 |
| hypothetical protein | HMPREF9696_02465 | Not Available | Negative | 2561401 - 2562477 | 38725.9 |
| hypothetical protein | HMPREF9696_02466 | Not Available | Positive | 2562618 - 2563211 | 20735.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.