Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna protecting protein dpra | HMPREF9696_01292 | Not Available | Positive | 1400916 - 1402037 | 39699.8 |
| hypothetical protein | HMPREF9696_01293 | Not Available | Negative | 1402038 - 1402811 | 26157.5 |
| hypothetical protein | HMPREF9696_01294 | Not Available | Positive | 1402924 - 1403376 | 16706.3 |
| hypothetical protein | HMPREF9696_01295 | Not Available | Negative | 1403373 - 1403594 | 8073.61 |
| dna topoisomerase i | HMPREF9696_01296 | Not Available | Positive | 1403836 - 1406619 | 101323.0 |
| ribonuclease r | HMPREF9696_01297 | Not Available | Positive | 1406619 - 1408952 | 85423.7 |
| hypothetical protein | HMPREF9696_01298 | Not Available | Positive | 1408974 - 1409441 | 16985.8 |
| hypothetical protein | HMPREF9696_01299 | Not Available | Positive | 1409438 - 1410172 | 26655.3 |
| hypothetical protein | HMPREF9696_01300 | Not Available | Positive | 1410278 - 1411132 | 30504.1 |
| 50s ribosomal protein l33 | HMPREF9696_01301 | Not Available | Positive | 1411449 - 1411616 | 6290.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.