Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9696_01263 | Not Available | Positive | 1371690 - 1372331 | 24138.7 |
| uracil-dna glycosylase, family 4 | HMPREF9696_01264 | Not Available | Positive | 1372312 - 1373040 | 26488.6 |
| hypothetical protein | HMPREF9696_01265 | Not Available | Negative | 1373037 - 1373612 | 20696.0 |
| ssra-binding protein | HMPREF9696_01266 | Not Available | Negative | 1373615 - 1374088 | 18106.0 |
| large-conductance mechanosensitive channel | HMPREF9696_01267 | Not Available | Negative | 1374212 - 1374625 | 14729.4 |
| dihydrodipicolinate synthase | HMPREF9696_01268 | Not Available | Negative | 1374650 - 1375540 | 31453.0 |
| hypothetical protein | HMPREF9696_01269 | Not Available | Positive | 1375791 - 1377965 | 79296.5 |
| hypothetical protein | HMPREF9696_01270 | Not Available | Positive | 1378118 - 1379002 | 31677.3 |
| hypothetical protein | HMPREF9696_01271 | Not Available | Negative | 1379409 - 1380932 | 53584.1 |
| Trna-ser | Not Available | Not Available | Positive | 1381582 - 1381673 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.