Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna topoisomerase iv, a subunit | HMPREF9696_01253 | Not Available | Negative | 1361060 - 1363312 | 83907.0 |
| dna repair protein reco | HMPREF9696_01254 | Not Available | Negative | 1363393 - 1364142 | 27284.6 |
| hypothetical protein | HMPREF9696_01255 | Not Available | Negative | 1364189 - 1364587 | 14487.8 |
| gtpase era | HMPREF9696_01256 | Not Available | Negative | 1364584 - 1365510 | 34276.3 |
| ribonuclease 3 | HMPREF9696_01257 | Not Available | Negative | 1365503 - 1366309 | 28497.1 |
| signal peptidase i | HMPREF9696_01258 | Not Available | Negative | 1366306 - 1367064 | 28482.1 |
| holo-[acyl-carrier-protein] synthase | HMPREF9696_01259 | Not Available | Negative | 1367274 - 1367693 | 15418.0 |
| pyridoxine 5'-phosphate synthase | HMPREF9696_01260 | Not Available | Negative | 1367690 - 1368460 | 27695.7 |
| rela/spot family protein | HMPREF9696_01261 | Not Available | Negative | 1368487 - 1370766 | 84395.0 |
| dna-directed rna polymerase subunit omega | HMPREF9696_01262 | Not Available | Negative | 1370945 - 1371337 | 14323.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.