Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase (ggdef) domain-containing protein | HMPREF9696_01084 | Not Available | Positive | 1190113 - 1191180 | 39630.3 |
| hypothetical protein | HMPREF9696_01085 | Not Available | Negative | 1191168 - 1191644 | 17540.2 |
| iron-sulfur cluster assembly accessory protein | HMPREF9696_01086 | Not Available | Negative | 1191710 - 1192117 | 14449.3 |
| fes assembly suf system protein | HMPREF9696_01087 | Not Available | Negative | 1192190 - 1192570 | 13704.2 |
| cysteine desulfurase, sufs subfamily | HMPREF9696_01088 | Not Available | Negative | 1192567 - 1193832 | 46116.2 |
| fes assembly protein sufd | HMPREF9696_01089 | Not Available | Negative | 1193811 - 1195133 | 47012.0 |
| fes assembly atpase sufc | HMPREF9696_01090 | Not Available | Negative | 1195146 - 1195904 | 27358.4 |
| fes assembly protein sufb | HMPREF9696_01091 | Not Available | Negative | 1195901 - 1197379 | 55088.3 |
| hypothetical protein | HMPREF9696_01092 | Not Available | Negative | 1197462 - 1198628 | 40135.4 |
| hypothetical protein | HMPREF9696_01093 | Not Available | Positive | 1198838 - 1199485 | 23850.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.