Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phenylacetic acid degradation operon negative regulatory protein paax | HMPREF9696_01055 | Not Available | Negative | 1157968 - 1158873 | 33024.6 |
| hypothetical protein | HMPREF9696_01056 | Not Available | Negative | 1159068 - 1159217 | 5239.3 |
| outer membrane autotransporter barrel domain-containing protein | HMPREF9696_01057 | Not Available | Positive | 1159493 - 1162453 | 99192.6 |
| Trna-glu | Not Available | Not Available | Positive | 1162599 - 1162673 | Not Available |
| hypothetical protein | HMPREF9696_01058 | Not Available | Positive | 1162787 - 1163563 | 28912.5 |
| hypothetical protein | HMPREF9696_01059 | Not Available | Positive | 1163646 - 1164218 | 19972.4 |
| hypothetical protein | HMPREF9696_01060 | Not Available | Negative | 1164235 - 1164483 | 8370.99 |
| hypothetical protein | HMPREF9696_01061 | Not Available | Negative | 1164523 - 1164720 | 7062.48 |
| kama family protein | HMPREF9696_01062 | Not Available | Negative | 1164717 - 1165784 | 39111.0 |
| lysine-trna ligase-like protein genx | HMPREF9696_01063 | Not Available | Negative | 1165781 - 1166836 | 39269.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.