Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, rnd family, mfp subunit | HMPREF9696_01035 | Not Available | Positive | 1137511 - 1138692 | 42489.9 |
| czca family heavy metal efflux pump | HMPREF9696_01036 | Not Available | Positive | 1138705 - 1141929 | 114825.0 |
| hypothetical protein | HMPREF9696_01037 | Not Available | Negative | 1141935 - 1142639 | 24930.6 |
| hypothetical protein | HMPREF9696_01038 | Not Available | Negative | 1142632 - 1143414 | 27856.8 |
| hypothetical protein | HMPREF9696_01039 | Not Available | Negative | 1143411 - 1144358 | 33450.8 |
| hypothetical protein | HMPREF9696_01040 | Not Available | Negative | 1144362 - 1145234 | 29755.5 |
| hypothetical protein | HMPREF9696_01041 | Not Available | Negative | 1145357 - 1146523 | 41076.6 |
| hypothetical protein | HMPREF9696_01042 | Not Available | Positive | 1146716 - 1147507 | 27993.7 |
| phenylacetic acid degradation protein paad | HMPREF9696_01043 | Not Available | Positive | 1147507 - 1147974 | 16868.8 |
| phenylacetate-coa ligase | HMPREF9696_01044 | Not Available | Positive | 1147990 - 1149327 | 50088.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.