Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia clevelandensis |
| Strain | ATCC 49720 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
840236 bp
Thymine Count
843657 bp
Guanine Count
1357175 bp
Cytosine Count
1353376 bp
Genome Length
4394444 bp
Protein-coding Genes
4209 genes
Non-Coding Genes
55 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF9696_00979 | Not Available | Negative | 1070407 - 1071471 | 37942.4 |
| bifunctional enzyme ispd/ispf | HMPREF9696_00980 | Not Available | Positive | 1071805 - 1072887 | 38075.1 |
| competence/damage-inducible protein cina | HMPREF9696_00981 | Not Available | Positive | 1072884 - 1073513 | 22044.6 |
| hypothetical protein | HMPREF9696_00982 | Not Available | Negative | 1073389 - 1073859 | 17779.4 |
| lipoyl synthase | HMPREF9696_00983 | Not Available | Negative | 1073866 - 1074825 | 35282.3 |
| dna-3-methyladenine glycosylase | HMPREF9696_00984 | Not Available | Positive | 1074965 - 1075573 | 22168.3 |
| hypothetical protein | HMPREF9696_00985 | Not Available | Negative | 1075851 - 1076237 | 14147.5 |
| hypothetical protein | HMPREF9696_00986 | Not Available | Negative | 1076295 - 1077464 | 40994.8 |
| valyl-trna synthetase | HMPREF9696_00987 | Not Available | Negative | 1077461 - 1080358 | 108547.0 |
| hypothetical protein | HMPREF9696_00988 | Not Available | Negative | 1080533 - 1081282 | 26572.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.