Shinella sp. HZN7

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Shinella

Description

Taxonomy

Kingdom	Pseudomonadati
Phylum	Pseudomonadota
Class	Alphaproteobacteria
Order	Hyphomicrobiales
Family	Rhizobiaceae
Genus	Shinella
Species	Shinella sp. HZN7
Strain	No strain

Profile

Physiology
Gram staining properties	Not Available
Shape	Not Available
Mobility	Not Available
Flagellar presence	Not Available
Number of membranes	Not Available

Ecology, Host, and Life Cycle
Oxygen requirements	Not Available
Optimal temperature	Not Available
Temperature range	Not Available
Habitat	active sludge of a wastewater-treatment system
Biotic relationship	Not Available
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Not Available
Energy source	Not Available
Pathogenicity	Not Available

Genome Summary

Shinella sp. HZN7 plasmid pShin-01, complete sequence.

NZ_CP015737.1 NZ_CP015741.1 NZ_CP015748.1 NZ_CP015739.1 NZ_CP015745.1 NZ_CP015742.1 NZ_CP015736.1 NZ_CP015746.1 NZ_CP015738.1 NZ_CP015744.1 NZ_CP015747.1 NZ_CP015740.1 NZ_CP015743.1

Gene Summary

Adenine Count

102122 bp

Thymine Count

107513 bp

Guanine Count

206401 bp

Cytosine Count

204503 bp

Genome Length

620539 bp

Protein-coding Genes

586 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
deor/glpr family dna-binding transcription regulator	shn_RS23625	P32144	Negative	258762 - 259523	27308.8
abc transporter substrate-binding protein	shn_RS23630	Not Available	Positive	259754 - 260719	35390.8
glycine betaine/l-proline abc transporter atp-binding protein	shn_RS23635	P46920	Positive	260814 - 261833	36569.6
proline/glycine betaine abc transporter permease	shn_RS23640	P14176	Positive	261838 - 263871	72743.3
choline/ethanolamine kinase family protein	shn_RS23645	Not Available	Positive	263871 - 264782	33440.7
fad-dependent oxidoreductase	shn_RS23650	Q99LB7	Positive	264779 - 267220	89160.4
metal/formaldehyde-sensitive transcriptional repressor	shn_RS23655	P55757	Positive	267310 - 267582	10012.3
cdf family co(ii)/ni(ii) efflux transporter dmef	shn_RS23660	Not Available	Positive	267670 - 268662	35694.6
class i sam-dependent methyltransferase	shn_RS23665	Not Available	Negative	268677 - 269318	22153.5
phosphotransferase family protein	shn_RS23670	P14181	Positive	269399 - 270304	32971.3

Displaying genes 251 – 260 of 7132 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	CAS number	Average mass Monoisotopic mass
BASm0000263	4-(hydroxymethyl)benzenesulfonateC7H7O4S	Not available	Average187.19Da Monoisotopic187.007053459Da
BASm0000387	(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6	Not available	Average455.432Da Monoisotopic455.1564286Da
BASm0000527	5-oxopentanoateC5H7O3	Not available	Average115.109Da Monoisotopic115.040067665Da
BASm0000705	2-dehydro-3-deoxy-D-arabinonateC5H7O5	Not available	Average147.107Da Monoisotopic147.0298969Da
BASm0000738	D-lyxoseC5H10O5	`1114-34-7`	Average150.1299Da Monoisotopic150.05282343Da
BASm0000950	L-xyluloseC5H10O5	`527-50-4`	Average150.1299Da Monoisotopic150.05282343Da
BASm0001086	scyllo-inososeC6H10O6	Not available	Average178.14Da Monoisotopic178.0477381Da
BASm0001225	dodecanoateC12H23O2	Not available	Average199.3098Da Monoisotopic199.169805Da
BASm0001327	L-fuconateC6H11O6	Not available	Average179.149Da Monoisotopic179.0561117Da
BASm0001362	octadecanoateC18H35O2	Not available	Average283.4693Da Monoisotopic283.263705364Da

Displaying 1–10 of 60 metabolites

Health Effects

No health effects information available for this bacterium.