Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | active sludge of a wastewater-treatment system |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7 plasmid pShin-01, complete sequence.
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | shn_RS12865 | Q9VGR2 | Positive | 2675412 - 2676512 | 39196.1 |
| peptidoglycan editing factor pgef | shn_RS12870 | Q9RT03 | Positive | 2676616 - 2677407 | 28693.8 |
| xaa-pro peptidase family protein | shn_RS12875 | Not Available | Positive | 2677443 - 2678594 | 42584.1 |
| hypothetical protein | shn_RS12880 | Not Available | Positive | 2678710 - 2679468 | 26312.8 |
| ribose-phosphate pyrophosphokinase | shn_RS12885 | Q92N73 | Positive | 2679594 - 2680526 | 33614.5 |
| kazal-type serine protease inhibitor | shn_RS12890 | Not Available | Positive | 2680602 - 2681156 | 20867.2 |
| duf779 domain-containing protein | shn_RS12895 | Not Available | Negative | 2681330 - 2681704 | 13525.1 |
| aldehyde dehydrogenase | shn_RS12900 | A1B4L2 | Negative | 2681832 - 2683340 | 55223.1 |
| yifb family mg chelatase-like aaa atpase | shn_RS12905 | Not Available | Negative | 2683491 - 2684449 | 32793.2 |
| benzoate/h(+) symporter bene family transporter | shn_RS12910 | P76103 | Positive | 2684685 - 2685875 | 39762.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.