Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | active sludge of a wastewater-treatment system |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7 plasmid pShin-01, complete sequence.
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | shn_RS12825 | Not Available | Positive | 2668584 - 2669516 | 34001.1 |
| hypothetical protein | shn_RS12830 | Not Available | Positive | 2669836 - 2670069 | 8733.92 |
| recombinase family protein | shn_RS37020 | Not Available | Positive | 2670082 - 2670951 | 32229.6 |
| zinc ribbon domain-containing protein | shn_RS37025 | Not Available | Positive | 2670933 - 2671337 | 14878.9 |
| hypothetical protein | shn_RS37030 | Not Available | Positive | 2671354 - 2671755 | 14604.2 |
| pp_02575 | shn_RS12840 | Not Available | Negative | 2671844 - 2672185 | Not Available |
| pyrroline-5-carboxylate reductase | shn_RS12845 | P22008 | Negative | 2672375 - 2673193 | 27338.3 |
| ybjn domain-containing protein | shn_RS12850 | Not Available | Negative | 2673196 - 2673696 | 18755.1 |
| accessory factor ubik family protein | shn_RS12855 | Not Available | Negative | 2674088 - 2674345 | 9403.28 |
| prolipoprotein diacylglyceryl transferase | shn_RS12860 | B5ZY45 | Positive | 2674587 - 2675399 | 29347.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.