Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | active sludge of a wastewater-treatment system |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7 plasmid pShin-01, complete sequence.
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospho-n-acetylmuramoyl-pentapeptide- transferase | shn_RS11755 | B3PTW3 | Negative | 2433302 - 2434402 | 38717.2 |
| udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligase | shn_RS11760 | Q9AKP1 | Negative | 2434519 - 2435952 | 50251.5 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | shn_RS11765 | Q92NL6 | Negative | 2435949 - 2437400 | 50457.2 |
| penicillin-binding protein 2 | shn_RS11770 | B8H0A0 | Negative | 2437465 - 2439213 | 62714.8 |
| hypothetical protein | shn_RS11775 | Not Available | Negative | 2439213 - 2439602 | 14269.3 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | shn_RS11780 | Q92NL4 | Negative | 2439606 - 2440631 | 35890.0 |
| division/cell wall cluster transcriptional repressor mraz | shn_RS11785 | B9JH60 | Negative | 2440646 - 2441086 | 16360.5 |
| catb-related o-acetyltransferase | shn_RS11790 | Not Available | Negative | 2441735 - 2442478 | 27175.3 |
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 2442709 - 2443104 | Not Available |
| fad-binding oxidoreductase | shn_RS11800 | Not Available | Negative | 2443146 - 2444327 | 41964.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.