Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | active sludge of a wastewater-treatment system |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7 plasmid pShin-01, complete sequence.
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-glu | Not Available | Not Available | Positive | 1704714 - 1704788 | Not Available |
| Trna-glu | Not Available | Not Available | Positive | 1705310 - 1705384 | Not Available |
| ycbk family protein | shn_RS08275 | Not Available | Negative | 1705523 - 1706833 | 45596.3 |
| lactoylglutathione lyase | shn_RS08280 | Q09751 | Negative | 1707172 - 1707612 | 16534.5 |
| cold-shock protein | shn_RS08285 | P0A9Y1 | Positive | 1707808 - 1708386 | 21505.0 |
| duf192 domain-containing protein | shn_RS08290 | Not Available | Positive | 1708386 - 1708883 | 18359.4 |
| Trna-pro | Not Available | Not Available | Positive | 1708974 - 1709050 | Not Available |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine s-methyltransferase | shn_RS08300 | Q98A73 | Positive | 1709656 - 1712016 | 86567.6 |
| acyl-coa thioesterase | shn_RS08305 | O66120 | Positive | 1712013 - 1712834 | 28796.0 |
| glutaredoxin-like protein nrdh | shn_RS08310 | P0AC67 | Positive | 1713330 - 1713551 | 7930.52 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.