Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Shinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Shinella |
| Species | Shinella sp. HZN7 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | active sludge of a wastewater-treatment system |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Shinella sp. HZN7 plasmid pShin-01, complete sequence.
Gene Summary
Adenine Count
102122 bp
Thymine Count
107513 bp
Guanine Count
206401 bp
Cytosine Count
204503 bp
Genome Length
620539 bp
Protein-coding Genes
586 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
13
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease e/g | shn_RS07335 | P44443 | Negative | 1521152 - 1524031 | 105974.0 |
| n-acetylmuramoyl-l-alanine amidase | shn_RS07340 | P63884 | Positive | 1524666 - 1525907 | 44304.9 |
| penicillin-binding protein 1a | shn_RS07345 | Q1RKC5 | Positive | 1526171 - 1528618 | 88718.8 |
| peptide chain release factor 2 | shn_RS07355 | Q2W3F8 | Positive | 1528720 - 1529851 | 42273.4 |
| hypothetical protein | shn_RS07360 | Not Available | Negative | 1529966 - 1530460 | 17765.8 |
| nad kinase | shn_RS07365 | Q92QJ0 | Negative | 1530495 - 1531268 | 28070.4 |
| hypothetical protein | shn_RS07370 | Not Available | Negative | 1531393 - 1531587 | 6846.27 |
| Trna-thr | Not Available | Not Available | Positive | 1531812 - 1531887 | Not Available |
| lysr family transcriptional regulator | shn_RS07380 | Not Available | Negative | 1531942 - 1532889 | 34674.1 |
| fmn-dependent nadh-azoreductase | shn_RS07385 | Q92QI7 | Positive | 1533021 - 1533644 | 21912.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.