Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | /taxonomy?family=Lachnospiraceae&kingdom=Bacillati&klass=Clostridia&level=genus&order=Lachnospirales&phylum=Bacillota |
| Species | Lachnospiraceae bacterium NK3A20 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
678240 bp
Thymine Count
675062 bp
Guanine Count
806101 bp
Cytosine Count
799351 bp
Genome Length
2958954 bp
Protein-coding Genes
2469 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine transport system atp-binding protein | SAMN02745687_02519 | Not Available | Negative | 2884798 - 2886249 | 54038.9 |
| transcriptional regulator, xre family with cupin sensor | SAMN02745687_02520 | Not Available | Negative | 2886325 - 2886882 | 21186.0 |
| putative transposase | SAMN02745687_02521 | Not Available | Negative | 2887226 - 2887373 | 5578.58 |
| dna-binding response regulator, ompr family, contains rec and winged-helix (whth) domain | SAMN02745687_02522 | Not Available | Positive | 2887803 - 2888474 | 25257.4 |
| signal transduction histidine kinase | SAMN02745687_02523 | Not Available | Positive | 2888471 - 2889553 | 40736.1 |
| abc-2 type transport system atp-binding protein | SAMN02745687_02524 | Not Available | Positive | 2889701 - 2890624 | 34092.5 |
| abc-2 type transport system permease protein | SAMN02745687_02525 | Not Available | Positive | 2890621 - 2891556 | 34584.4 |
| rna polymerase sigma factor, sigma-70 family | SAMN02745687_02526 | Not Available | Positive | 2892048 - 2892491 | 17454.5 |
| helix-turn-helix domain-containing protein | SAMN02745687_02527 | Not Available | Positive | 2892475 - 2892729 | 9482.53 |
| transposon-encoded protein tnpw | SAMN02745687_02528 | Not Available | Positive | 2893145 - 2893315 | 6419.84 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.