Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | /taxonomy?family=Lachnospiraceae&kingdom=Bacillati&klass=Clostridia&level=genus&order=Lachnospirales&phylum=Bacillota |
| Species | Lachnospiraceae bacterium NK3A20 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
678240 bp
Thymine Count
675062 bp
Guanine Count
806101 bp
Cytosine Count
799351 bp
Genome Length
2958954 bp
Protein-coding Genes
2469 genes
Non-Coding Genes
92 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized membrane protein yesl | SAMN02745687_00087 | Not Available | Positive | 112028 - 112648 | 23806.6 |
| sugar phosphate isomerase/epimerase | SAMN02745687_00088 | Not Available | Positive | 112695 - 113531 | 30845.9 |
| unsaturated rhamnogalacturonyl hydrolase | SAMN02745687_00089 | Not Available | Positive | 113687 - 114829 | 44270.6 |
| polygalacturonase | SAMN02745687_00090 | Not Available | Positive | 114847 - 116412 | 57676.3 |
| 4-deoxy-l-threo-5-hexosulose-uronate ketol-isomerase | SAMN02745687_00091 | Not Available | Positive | 116522 - 117388 | 33099.4 |
| gluconate 5-dehydrogenase | SAMN02745687_00092 | Not Available | Positive | 117496 - 118368 | 31565.8 |
| ribose 5-phosphate isomerase rpib | SAMN02745687_00093 | Not Available | Positive | 118400 - 119041 | 23234.5 |
| tim44-like domain-containing protein | SAMN02745687_00094 | Not Available | Positive | 119268 - 120344 | 40249.1 |
| 2-dehydro-3-deoxyphosphogluconate aldolase / (4s)-4-hydroxy-2-oxoglutarate aldolase | SAMN02745687_00095 | Not Available | Negative | 120608 - 121279 | 23754.0 |
| 2-dehydro-3-deoxygluconokinase | SAMN02745687_00096 | Not Available | Negative | 121315 - 122481 | 42377.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.