Pseudohoeflea suaedae str. YC6898

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Pseudohoeflea

Description

Pseudohoeflea suaedae strain YC6898 is a Gram-negative, rod-shaped bacterium that is strictly aerobic and exhibits optimal growth at 32.0°C. Characterized by its non-spore-forming nature, this microbe's morphological and physiological traits suggest a specialized adaptation to its environmental niche. As a Gram-negative organism, P. suaedae str. YC6898 possesses a double membrane structure, which may contribute to its resilience in competitive microbial environments. The rod shape is common among many bacteria and may facilitate motility and nutrient acquisition, although specific motility mechanisms for this strain have not been detailed. The requirement for aerobic conditions indicates that P. suaedae str. YC6898 relies on oxygen for respiration, which may influence its ecological role, particularly in oxygen-rich habitats. The optimal temperature of 32.0°C suggests that this bacterium is well-suited to environments that do not experience extreme temperature fluctuations, potentially aligning with mesophilic ecosystems. In summary, the physiological attributes of Pseudohoeflea suaedae str. YC6898 reflect its adaptation to specific environmental conditions, which may include saline or brackish habitats given its association with the genus. Understanding the ecological dynamics of this bacterium could provide insights into its interactions within microbial communities and its potential roles in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusPseudohoeflea
SpeciesPseudohoeflea suaedae
StrainYC6898

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudohoeflea suaedae strain YC6898 21, whole genome shotgun

Gene Summary

Adenine Count

696462 bp

Thymine Count

716519 bp

Guanine Count

1190145 bp

Cytosine Count

1169038 bp

Genome Length

3772164 bp

Protein-coding Genes

3414 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s21E2A64_16400Not AvailablePositive3466461 - 34666888999.12
hypothetical proteinE2A64_16405Not AvailablePositive3466785 - 34670579740.83
udp-n-acetylmuramate dehydrogenaseE2A64_16410Not AvailableNegative3467446 - 346842335046.1
udp-n-acetylmuramate--l-alanine ligaseE2A64_16415Not AvailableNegative3468423 - 346982950594.5
undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferaseE2A64_16420Not AvailableNegative3469845 - 347094238126.1
putative lipid ii flippase ftswE2A64_16425Not AvailableNegative3470942 - 347210242423.0
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseE2A64_16430Not AvailableNegative3472104 - 347352849539.7
udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligaseE2A64_16435Not AvailableNegative3473525 - 347506954947.1
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseE2A64_16440Not AvailableNegative3475066 - 347653550950.6
penicillin-binding protein 2E2A64_16445Not AvailableNegative3476593 - 347832963148.1

Displaying genes 3261 – 3270 of 3531 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.