Pseudohoeflea suaedae str. YC6898

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Pseudohoeflea

Description

Pseudohoeflea suaedae strain YC6898 is a Gram-negative, rod-shaped bacterium that is strictly aerobic and exhibits optimal growth at 32.0°C. Characterized by its non-spore-forming nature, this microbe's morphological and physiological traits suggest a specialized adaptation to its environmental niche. As a Gram-negative organism, P. suaedae str. YC6898 possesses a double membrane structure, which may contribute to its resilience in competitive microbial environments. The rod shape is common among many bacteria and may facilitate motility and nutrient acquisition, although specific motility mechanisms for this strain have not been detailed. The requirement for aerobic conditions indicates that P. suaedae str. YC6898 relies on oxygen for respiration, which may influence its ecological role, particularly in oxygen-rich habitats. The optimal temperature of 32.0°C suggests that this bacterium is well-suited to environments that do not experience extreme temperature fluctuations, potentially aligning with mesophilic ecosystems. In summary, the physiological attributes of Pseudohoeflea suaedae str. YC6898 reflect its adaptation to specific environmental conditions, which may include saline or brackish habitats given its association with the genus. Understanding the ecological dynamics of this bacterium could provide insights into its interactions within microbial communities and its potential roles in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusPseudohoeflea
SpeciesPseudohoeflea suaedae
StrainYC6898

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudohoeflea suaedae strain YC6898 21, whole genome shotgun

Gene Summary

Adenine Count

696462 bp

Thymine Count

716519 bp

Guanine Count

1190145 bp

Cytosine Count

1169038 bp

Genome Length

3772164 bp

Protein-coding Genes

3414 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
zn-dependent hydrolaseE2A64_15440Not AvailableNegative3248799 - 324963529923.8
yebc/pmpr family dna-binding transcriptional regulatorE2A64_15445Not AvailablePositive3249846 - 325059226806.4
llm class flavin-dependent oxidoreductaseE2A64_15450Not AvailableNegative3250687 - 325168536193.6
crossover junction endodeoxyribonuclease ruvcE2A64_15455Not AvailablePositive3251829 - 325233518324.2
abrb/maze/spovt family dna-binding domain-containing proteinE2A64_15460Not AvailablePositive3252421 - 32526789533.35
pin domain-containing proteinE2A64_15465Not AvailablePositive3252675 - 325308815592.7
holliday junction branch migration protein ruvaE2A64_15470Not AvailablePositive3253101 - 325371521423.7
holliday junction branch migration dna helicase ruvbE2A64_15475Not AvailablePositive3253855 - 325489537988.8
metallophosphoesteraseE2A64_15480Not AvailablePositive3254896 - 325579532518.2
nudix domain-containing proteinE2A64_15485Not AvailablePositive3255798 - 325635821012.6

Displaying genes 3071 – 3080 of 3531 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.