Pseudohoeflea suaedae str. YC6898

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Pseudohoeflea

Description

Pseudohoeflea suaedae strain YC6898 is a Gram-negative, rod-shaped bacterium that is strictly aerobic and exhibits optimal growth at 32.0°C. Characterized by its non-spore-forming nature, this microbe's morphological and physiological traits suggest a specialized adaptation to its environmental niche. As a Gram-negative organism, P. suaedae str. YC6898 possesses a double membrane structure, which may contribute to its resilience in competitive microbial environments. The rod shape is common among many bacteria and may facilitate motility and nutrient acquisition, although specific motility mechanisms for this strain have not been detailed. The requirement for aerobic conditions indicates that P. suaedae str. YC6898 relies on oxygen for respiration, which may influence its ecological role, particularly in oxygen-rich habitats. The optimal temperature of 32.0°C suggests that this bacterium is well-suited to environments that do not experience extreme temperature fluctuations, potentially aligning with mesophilic ecosystems. In summary, the physiological attributes of Pseudohoeflea suaedae str. YC6898 reflect its adaptation to specific environmental conditions, which may include saline or brackish habitats given its association with the genus. Understanding the ecological dynamics of this bacterium could provide insights into its interactions within microbial communities and its potential roles in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusPseudohoeflea
SpeciesPseudohoeflea suaedae
StrainYC6898

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudohoeflea suaedae strain YC6898 21, whole genome shotgun

Gene Summary

Adenine Count

696462 bp

Thymine Count

716519 bp

Guanine Count

1190145 bp

Cytosine Count

1169038 bp

Genome Length

3772164 bp

Protein-coding Genes

3414 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
elongation factor tsE2A64_12890Not AvailablePositive2680371 - 268129431993.9
ump kinaseE2A64_12895Not AvailablePositive2681399 - 268212425116.6
ribosome recycling factorE2A64_12900Not AvailablePositive2682201 - 268276120989.1
isoprenyl transferaseE2A64_12905Not AvailablePositive2682812 - 268355527810.9
phosphatidate cytidylyltransferaseE2A64_12910Not AvailablePositive2683555 - 268439129146.4
rip metalloprotease rsepE2A64_12915Not AvailablePositive2684463 - 268559640883.8
outer membrane protein assembly factor bamaE2A64_12920Not AvailablePositive2685794 - 268816085651.0
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseE2A64_12925Not AvailablePositive2688228 - 268929236023.2
3-hydroxyacyl-acp dehydratase fabzE2A64_12930Not AvailablePositive2689289 - 268975916992.7
acyl-acp--udp-n-acetylglucosamine o-acyltransferaseE2A64_12935Not AvailablePositive2689759 - 269057428205.0

Displaying genes 2571 – 2580 of 3531 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.