Pseudohoeflea suaedae str. YC6898

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Pseudohoeflea

Description

Pseudohoeflea suaedae strain YC6898 is a Gram-negative, rod-shaped bacterium that is strictly aerobic and exhibits optimal growth at 32.0°C. Characterized by its non-spore-forming nature, this microbe's morphological and physiological traits suggest a specialized adaptation to its environmental niche. As a Gram-negative organism, P. suaedae str. YC6898 possesses a double membrane structure, which may contribute to its resilience in competitive microbial environments. The rod shape is common among many bacteria and may facilitate motility and nutrient acquisition, although specific motility mechanisms for this strain have not been detailed. The requirement for aerobic conditions indicates that P. suaedae str. YC6898 relies on oxygen for respiration, which may influence its ecological role, particularly in oxygen-rich habitats. The optimal temperature of 32.0°C suggests that this bacterium is well-suited to environments that do not experience extreme temperature fluctuations, potentially aligning with mesophilic ecosystems. In summary, the physiological attributes of Pseudohoeflea suaedae str. YC6898 reflect its adaptation to specific environmental conditions, which may include saline or brackish habitats given its association with the genus. Understanding the ecological dynamics of this bacterium could provide insights into its interactions within microbial communities and its potential roles in biogeochemical cycles.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusPseudohoeflea
SpeciesPseudohoeflea suaedae
StrainYC6898

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitymotile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature32
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudohoeflea suaedae strain YC6898 21, whole genome shotgun

Gene Summary

Adenine Count

696462 bp

Thymine Count

716519 bp

Guanine Count

1190145 bp

Cytosine Count

1169038 bp

Genome Length

3772164 bp

Protein-coding Genes

3414 genes

Non-Coding Genes

117 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptidylprolyl isomeraseE2A64_09575Not AvailablePositive2025099 - 202560818415.8
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaE2A64_09580Not AvailablePositive2025682 - 202675539052.1
trna guanosine(34) transglycosylase tgtE2A64_09585Not AvailablePositive2026755 - 202788841293.8
duf4864 domain-containing proteinE2A64_09590Not AvailableNegative2027893 - 202832715713.1
energy-coupling factor transporter transmembrane protein ecftE2A64_09595Not AvailableNegative2028380 - 202897321513.2
abc transporter atp-binding proteinE2A64_09600Not AvailableNegative2028970 - 202963524375.4
biotin transporter bioyE2A64_09605Not AvailableNegative2029655 - 203020918990.0
coa-acylating methylmalonate-semialdehyde dehydrogenaseE2A64_09610Not AvailablePositive2030473 - 203197253701.4
acyl-coa dehydrogenaseE2A64_09615Not AvailablePositive2032053 - 203320141129.1
enoyl-coa hydratase/isomerase family proteinE2A64_09620Not AvailablePositive2033198 - 203424136650.9

Displaying genes 1971 – 1980 of 3531 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.