Poseidonocella pacifica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Poseidonocella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPoseidonocella
SpeciesPoseidonocella pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Poseidonocella pacifica strain DSM 29316 genome assembly, contig:

Gene Summary

Adenine Count

706138 bp

Thymine Count

704584 bp

Guanine Count

1105206 bp

Cytosine Count

1106080 bp

Genome Length

3622008 bp

Protein-coding Genes

3373 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
rna polymerase, sigma 32 subunit, rpohSAMN05421688_0401Not AvailablePositive401153 - 40204934025.5
predicted dehydrogenaseSAMN05421688_0402Not AvailablePositive402270 - 40324435985.0
protein of unknown functionSAMN05421688_0403Not AvailablePositive403241 - 40355211756.3
hypothetical proteinSAMN05421688_0404Not AvailableNegative403612 - 40387510113.7
oligoendopeptidase fSAMN05421688_0405Not AvailableNegative403877 - 40569768869.2
dna ligase-1SAMN05421688_0406Not AvailableNegative405762 - 40735160790.6
putative mrna 3-end processing factorSAMN05421688_0407Not AvailableNegative407348 - 40835236354.8
ureidoglycolate lyaseSAMN05421688_0408Not AvailablePositive408455 - 40928529421.6
gst-like proteinSAMN05421688_0409Not AvailableNegative409332 - 41003326563.7
alpha/beta hydrolase of unknown functionSAMN05421688_0410Not AvailableNegative410058 - 41098433377.7

Displaying genes 401 – 410 of 3429 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.