Poseidonocella pacifica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Poseidonocella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPoseidonocella
SpeciesPoseidonocella pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Poseidonocella pacifica strain DSM 29316 genome assembly, contig:

Gene Summary

Adenine Count

706138 bp

Thymine Count

704584 bp

Guanine Count

1105206 bp

Cytosine Count

1106080 bp

Genome Length

3622008 bp

Protein-coding Genes

3373 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna threonylcarbamoyl adenosine modification protein yeazSAMN05421688_3460Not AvailableNegative3570306 - 357087819775.6
fe-s cluster biogenesis protein nfua, 4fe-4s-binding domainSAMN05421688_3461Not AvailableNegative3570875 - 357144120097.8
hypothetical proteinSAMN05421688_3462Not AvailableNegative3571597 - 357193811767.9
nucleotide-binding universal stress protein, uspa familySAMN05421688_3463Not AvailableNegative3572233 - 357268816498.0
branched-chain amino acid aminotransferaseSAMN05421688_3464Not AvailableNegative3572752 - 357361230963.6
catechol 2,3-dioxygenaseSAMN05421688_3465Not AvailableNegative3573794 - 357428217866.0
l,d-transpeptidase catalytic domainSAMN05421688_3466Not AvailablePositive3574461 - 357500920507.3
tryptophanyl-trna synthetaseSAMN05421688_3467Not AvailableNegative3575012 - 357605238246.0
membrane associated serine protease, rhomboid familySAMN05421688_3468Not AvailablePositive3576126 - 357680924335.3
dna-binding transcriptional regulator, lysr familySAMN05421688_3469Not AvailableNegative3576817 - 357777935336.4

Displaying genes 3381 – 3390 of 3429 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.