Poseidonocella pacifica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Poseidonocella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPoseidonocella
SpeciesPoseidonocella pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Poseidonocella pacifica strain DSM 29316 genome assembly, contig:

Gene Summary

Adenine Count

706138 bp

Thymine Count

704584 bp

Guanine Count

1105206 bp

Cytosine Count

1106080 bp

Genome Length

3622008 bp

Protein-coding Genes

3373 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
udp-glucose 4-epimeraseSAMN05421688_3361Not AvailablePositive3480522 - 348150234417.3
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05421688_3362Not AvailablePositive3481486 - 348225626568.1
regulatory protein, gntr familySAMN05421688_3363Not AvailablePositive3482327 - 348274615797.3
protein of unknown functionSAMN05421688_3366Not AvailablePositive3484259 - 348466914765.5
dna-binding transcriptional regulator, lysr familySAMN05421688_3367Not AvailablePositive3484695 - 348560633117.6
2-keto-3-deoxy-l-rhamnonate aldolase rhmaSAMN05421688_3368Not AvailableNegative3485563 - 348635426340.1
trap-type c4-dicarboxylate transport system, small permease componentSAMN05421688_3369Not AvailablePositive3486553 - 348710119816.0
c4-dicarboxylate transporter, dctm subunitSAMN05421688_3370Not AvailablePositive3487098 - 348837844532.4
tripartite atp-independent transporter solute receptor, dctp familySAMN05421688_3371Not AvailablePositive3488406 - 348938035418.1
4-hydroxy-tetrahydrodipicolinate synthaseSAMN05421688_3372Not AvailableNegative3489444 - 349039433530.1

Displaying genes 3291 – 3300 of 3429 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.