Poseidonocella pacifica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Poseidonocella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPoseidonocella
SpeciesPoseidonocella pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Poseidonocella pacifica strain DSM 29316 genome assembly, contig:

Gene Summary

Adenine Count

706138 bp

Thymine Count

704584 bp

Guanine Count

1105206 bp

Cytosine Count

1106080 bp

Genome Length

3622008 bp

Protein-coding Genes

3373 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap-type c4-dicarboxylate transport system, substrate-binding proteinSAMN05421688_2884Not AvailableNegative2939223 - 294021235510.7
lysr family transcriptional regulator, nitrogen assimilation regulatory proteinSAMN05421688_2885Not AvailablePositive2940445 - 294134732707.2
l-idonate 5-dehydrogenaseSAMN05421688_2886Not AvailableNegative2941495 - 294253536489.4
lactate dehydrogenaseSAMN05421688_2887Not AvailableNegative2942545 - 294349233498.8
glucose 1-dehydrogenaseSAMN05421688_2888Not AvailablePositive2943572 - 294440529260.9
gluconate kinase, ski familySAMN05421688_2889Not AvailablePositive2944380 - 294495520142.4
transcriptional regulator, laci familySAMN05421688_2890Not AvailablePositive2944966 - 294599136786.4
4-hydroxy-4-methyl-2-oxoglutarate aldolaseSAMN05421688_2891Not AvailableNegative2946022 - 294669623605.6
acetyl-coa carboxylase biotin carboxyl carrier proteinSAMN05421688_2892Not AvailablePositive2946915 - 294737015356.1
acetyl-coa carboxylase, biotin carboxylase subunitSAMN05421688_2893Not AvailablePositive2947367 - 294873748642.4

Displaying genes 2831 – 2840 of 3429 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.