Poseidonocella pacifica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Poseidonocella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPoseidonocella
SpeciesPoseidonocella pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Poseidonocella pacifica strain DSM 29316 genome assembly, contig:

Gene Summary

Adenine Count

706138 bp

Thymine Count

704584 bp

Guanine Count

1105206 bp

Cytosine Count

1106080 bp

Genome Length

3622008 bp

Protein-coding Genes

3373 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lytic murein transglycosylaseSAMN05421688_2757Not AvailableNegative2820303 - 282147542463.7
response regulator receiver domain-containing proteinSAMN05421688_2758Not AvailablePositive2821689 - 282205113044.4
putative glutathione s-transferaseSAMN05421688_2759Not AvailableNegative2822052 - 282302637101.5
hypothetical proteinSAMN05421688_2760Not AvailablePositive2823195 - 282355413244.7
cystathione beta-lyaseSAMN05421688_2761Not AvailableNegative2823572 - 282474443188.6
peptide deformylaseSAMN05421688_2762Not AvailablePositive2824836 - 282536319656.0
peptide deformylaseSAMN05421688_2763Not AvailablePositive2825363 - 282585718468.4
methionyl-trna formyltransferaseSAMN05421688_2764Not AvailablePositive2825854 - 282675932139.6
ribonuclease hiSAMN05421688_2765Not AvailableNegative2827321 - 282778216968.0
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseSAMN05421688_2766Not AvailableNegative2827845 - 282879534346.1

Displaying genes 2711 – 2720 of 3429 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.