Poseidonocella pacifica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Poseidonocella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPoseidonocella
SpeciesPoseidonocella pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Poseidonocella pacifica strain DSM 29316 genome assembly, contig:

Gene Summary

Adenine Count

706138 bp

Thymine Count

704584 bp

Guanine Count

1105206 bp

Cytosine Count

1106080 bp

Genome Length

3622008 bp

Protein-coding Genes

3373 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
acetolactate synthase-1/2/3 large subunitSAMN05421688_2636Not AvailablePositive2698904 - 270063461313.9
cold-shock dna-binding protein familySAMN05421688_2637Not AvailablePositive2700985 - 27011917288.58
chromate transporterSAMN05421688_2638Not AvailablePositive2701411 - 270275746747.4
outer membrane protein ompaSAMN05421688_2639Not AvailableNegative2702798 - 270454062152.2
2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase)SAMN05421688_2640Not AvailableNegative2704650 - 270546828923.9
3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase)SAMN05421688_2641Not AvailableNegative2705465 - 270626829225.7
arabinose-5-phosphate isomeraseSAMN05421688_2642Not AvailableNegative2706265 - 270726935471.1
udp-glucose dehydrogenaseSAMN05421688_2643Not AvailablePositive2707375 - 270869447314.9
hemy proteinSAMN05421688_2644Not AvailableNegative2708922 - 271042154251.3
uncharacterized conserved proteinSAMN05421688_2645Not AvailableNegative2710432 - 271170043828.6

Displaying genes 2591 – 2600 of 3429 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.