Poseidonocella pacifica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Poseidonocella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPoseidonocella
SpeciesPoseidonocella pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Poseidonocella pacifica strain DSM 29316 genome assembly, contig:

Gene Summary

Adenine Count

706138 bp

Thymine Count

704584 bp

Guanine Count

1105206 bp

Cytosine Count

1106080 bp

Genome Length

3622008 bp

Protein-coding Genes

3373 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulator, marr familySAMN05421688_2435Not AvailableNegative2495789 - 249629819190.1
branched chain amino acid aminotransferase apoenzymeSAMN05421688_2436Not AvailablePositive2496452 - 249732132197.2
undecaprenyl-diphosphataseSAMN05421688_2437Not AvailableNegative2497311 - 249801826152.8
hypothetical proteinSAMN05421688_2438Not AvailableNegative2498127 - 24983527896.46
sulfoxide reductase heme-binding subunit yedzSAMN05421688_2440Not AvailableNegative2498648 - 249925322582.8
sulfoxide reductase catalytic subunit yedySAMN05421688_2441Not AvailableNegative2499253 - 250014633342.6
hypothetical proteinSAMN05421688_2442Not AvailablePositive2500303 - 250073715646.7
atp-dependent clp protease atp-binding subunit clpbSAMN05421688_2443Not AvailableNegative2500786 - 250340496057.9
orotidine-5'-phosphate decarboxylaseSAMN05421688_2444Not AvailablePositive2503608 - 250430323782.8
dna polymerase-4SAMN05421688_2445Not AvailablePositive2504495 - 250574845940.7

Displaying genes 2391 – 2400 of 3429 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.