Poseidonocella pacifica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Poseidonocella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPoseidonocella
SpeciesPoseidonocella pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Poseidonocella pacifica strain DSM 29316 genome assembly, contig:

Gene Summary

Adenine Count

706138 bp

Thymine Count

704584 bp

Guanine Count

1105206 bp

Cytosine Count

1106080 bp

Genome Length

3622008 bp

Protein-coding Genes

3373 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase)SAMN05421688_2214Not AvailableNegative2277588 - 227884444511.3
pyruvate dehydrogenase e1 componentSAMN05421688_2215Not AvailableNegative2278869 - 228152699641.0
4-diphosphocytidyl-2-c-methyl-d-erythritol kinaseSAMN05421688_2216Not AvailableNegative2281798 - 228263428502.3
tetratricopeptide repeat-containing proteinSAMN05421688_2217Not AvailableNegative2282621 - 228433062158.3
amidophosphoribosyltransferaseSAMN05421688_2218Not AvailablePositive2284548 - 228602053700.3
phosphoglycolate phosphataseSAMN05421688_2219Not AvailableNegative2286033 - 228670423744.5
udp-n-acetylglucosamine pyrophosphorylase /glucosamine-1-phosphate n-acetyltransferaseSAMN05421688_2220Not AvailablePositive2286812 - 228815847097.8
glucosamine--fructose-6-phosphate aminotransferase (isomerizing)SAMN05421688_2221Not AvailablePositive2288158 - 228998165177.2
electron-transferring-flavoprotein dehydrogenaseSAMN05421688_2222Not AvailableNegative2289986 - 229163259385.2
transcription elongation factor greaSAMN05421688_2223Not AvailablePositive2291851 - 229232117333.5

Displaying genes 2171 – 2180 of 3429 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.