Poseidonocella pacifica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Poseidonocella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPoseidonocella
SpeciesPoseidonocella pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Poseidonocella pacifica strain DSM 29316 genome assembly, contig:

Gene Summary

Adenine Count

706138 bp

Thymine Count

704584 bp

Guanine Count

1105206 bp

Cytosine Count

1106080 bp

Genome Length

3622008 bp

Protein-coding Genes

3373 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinSAMN05421688_2174Not AvailableNegative2235889 - 223719648582.8
rna polymerase sigma-70 factor, ecf subfamilySAMN05421688_2175Not AvailablePositive2237431 - 223799121287.3
anti-ecfsigma factor, chrrSAMN05421688_2176Not AvailablePositive2237988 - 223863222866.4
tungstate transport system permease proteinSAMN05421688_2177Not AvailablePositive2238755 - 223946224485.8
tungstate transport system atp-binding proteinSAMN05421688_2178Not AvailablePositive2239455 - 224022227654.7
tungstate transport system substrate-binding proteinSAMN05421688_2179Not AvailablePositive2240252 - 224105527932.4
dna binding domain-containing protein, excisionase familySAMN05421688_2180Not AvailablePositive2241066 - 224194732284.4
dna recombination protein rmucSAMN05421688_2181Not AvailableNegative2241944 - 224334451462.8
dna mismatch repair protein mutlSAMN05421688_2182Not AvailableNegative2243341 - 224518566710.3
d-alanine transaminaseSAMN05421688_2183Not AvailableNegative2245361 - 224622431661.0

Displaying genes 2131 – 2140 of 3429 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.