Poseidonocella pacifica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Poseidonocella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPoseidonocella
SpeciesPoseidonocella pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Poseidonocella pacifica strain DSM 29316 genome assembly, contig:

Gene Summary

Adenine Count

706138 bp

Thymine Count

704584 bp

Guanine Count

1105206 bp

Cytosine Count

1106080 bp

Genome Length

3622008 bp

Protein-coding Genes

3373 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
urease accessory proteinSAMN05421688_2114Not AvailablePositive2183527 - 218415021782.5
transcriptional regulator, trar/dksa familySAMN05421688_2115Not AvailablePositive2184207 - 21844769876.56
uncharacterized membrane protein yeihSAMN05421688_2116Not AvailablePositive2184531 - 218520823790.7
excinuclease abc subunit cSAMN05421688_2117Not AvailableNegative2185247 - 218709168186.7
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05421688_2118Not AvailableNegative2187393 - 218817227607.2
cation:h+ antiporterSAMN05421688_2119Not AvailableNegative2188184 - 218912532951.7
hypothetical proteinSAMN05421688_2120Not AvailableNegative2189128 - 21892986259.0
signal peptide peptidase sppaSAMN05421688_2121Not AvailableNegative2189303 - 219010028827.8
abc-2 type transport system permease proteinSAMN05421688_2122Not AvailableNegative2190203 - 219096427886.8
abc-2 type transport system atp-binding proteinSAMN05421688_2123Not AvailableNegative2190961 - 219189033562.7

Displaying genes 2071 – 2080 of 3429 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.