Poseidonocella pacifica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Poseidonocella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPoseidonocella
SpeciesPoseidonocella pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Poseidonocella pacifica strain DSM 29316 genome assembly, contig:

Gene Summary

Adenine Count

706138 bp

Thymine Count

704584 bp

Guanine Count

1105206 bp

Cytosine Count

1106080 bp

Genome Length

3622008 bp

Protein-coding Genes

3373 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trap-type c4-dicarboxylate transport system, small permease componentSAMN05421688_1963Not AvailableNegative2018584 - 201913520025.2
tripartite atp-independent transporter solute receptor, dctp familySAMN05421688_1964Not AvailableNegative2019207 - 202018735432.7
alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminaseSAMN05421688_1965Not AvailableNegative2020290 - 202147741843.9
fad/fmn-containing dehydrogenaseSAMN05421688_1966Not AvailablePositive2021607 - 2024516105094.0
dna-binding transcriptional regulator, gntr familySAMN05421688_1967Not AvailablePositive2024513 - 202518424427.4
4-aminobutyrate aminotransferase / (s)-3-amino-2-methylpropionate transaminaseSAMN05421688_1968Not AvailableNegative2025221 - 202661248530.5
transcriptional regulator, xre family with cupin sensorSAMN05421688_1969Not AvailablePositive2026778 - 202734720338.0
predicted amidohydrolaseSAMN05421688_1970Not AvailablePositive2027561 - 202852935263.2
arginine decarboxylaseSAMN05421688_1971Not AvailablePositive2028583 - 2031327103411.0
hypothetical proteinSAMN05421688_1972Not AvailablePositive2031356 - 203280454980.5

Displaying genes 1921 – 1930 of 3429 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.