Poseidonocella pacifica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Poseidonocella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPoseidonocella
SpeciesPoseidonocella pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Poseidonocella pacifica strain DSM 29316 genome assembly, contig:

Gene Summary

Adenine Count

706138 bp

Thymine Count

704584 bp

Guanine Count

1105206 bp

Cytosine Count

1106080 bp

Genome Length

3622008 bp

Protein-coding Genes

3373 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
chaperone modulatory protein cbpmSAMN05421688_0117Not AvailablePositive98137 - 9846612256.9
hypothetical proteinSAMN05421688_0118Not AvailablePositive99245 - 993704569.69
diguanylate cyclase (ggdef) domain-containing proteinSAMN05421688_0121Not AvailableNegative101697 - 10376075314.9
transposaseSAMN05421688_0123Not AvailableNegative104745 - 10550028478.5
hypothetical proteinSAMN05421688_0124Not AvailableNegative105501 - 1057077268.66
rhs repeat-associated core domain-containing proteinSAMN05421688_0125Not AvailablePositive105960 - 112199226658.0
ompa family proteinSAMN05421688_0126Not AvailablePositive112212 - 11333340713.8
hypothetical proteinSAMN05421688_0127Not AvailableNegative113704 - 1139769864.87
type iv secretion system protein virb9SAMN05421688_0129Not AvailableNegative115170 - 11615035836.7
type iv secretion system protein virb5SAMN05421688_0130Not AvailableNegative116147 - 11683025480.1

Displaying genes 121 – 130 of 3429 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.