Poseidonocella pacifica

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Poseidonocella

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusPoseidonocella
SpeciesPoseidonocella pacifica
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Poseidonocella pacifica strain DSM 29316 genome assembly, contig:

Gene Summary

Adenine Count

706138 bp

Thymine Count

704584 bp

Guanine Count

1105206 bp

Cytosine Count

1106080 bp

Genome Length

3622008 bp

Protein-coding Genes

3373 genes

Non-Coding Genes

56 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized membrane protein yfcc, ion transporter superfamilySAMN05421688_0107Not AvailableNegative89291 - 9074250834.1
hypothetical proteinSAMN05421688_0108Not AvailableNegative90939 - 9128613278.5
hypothetical proteinSAMN05421688_0109Not AvailableNegative91349 - 9176515095.2
mannose-6-phosphate isomerase, cupin superfamilySAMN05421688_0110Not AvailablePositive92192 - 9262315521.3
hypothetical proteinSAMN05421688_0111Not AvailableNegative92709 - 929036920.42
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN05421688_0112Not AvailablePositive93071 - 9382625173.2
lipoprotein-releasing system atp-binding proteinSAMN05421688_0113Not AvailableNegative93949 - 9462624074.1
lipoprotein-releasing system permease proteinSAMN05421688_0114Not AvailableNegative94623 - 9582841805.3
rnd family efflux transporter, mfp subunitSAMN05421688_0115Not AvailableNegative95828 - 9698840237.7
dnaj domain-containing proteinSAMN05421688_0116Not AvailablePositive97196 - 9814034115.0

Displaying genes 111 – 120 of 3429 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.