Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific tyrosine recombinase xerd | VIS19158_04496 | Not Available | Positive | 465228 - 466136 | 34770.0 |
| thiol:disulfide interchange protein dsbc | VIS19158_04501 | Not Available | Positive | 466160 - 466906 | 27281.7 |
| ssdna exonuclease recj | VIS19158_04506 | Not Available | Positive | 466946 - 468688 | 64042.8 |
| transcriptional regulator pdhr | VIS19158_04511 | Not Available | Positive | 469194 - 469958 | 28789.5 |
| pyruvate dehydrogenase subunit e1 | VIS19158_04516 | Not Available | Positive | 469990 - 472653 | 99261.9 |
| dihydrolipoamide dehydrogenase | VIS19158_04531 | Not Available | Positive | 474871 - 476301 | 51013.9 |
| smcr-like protein vvpr | VIS19158_04536 | Not Available | Negative | 476401 - 477015 | 23502.1 |
| hypoxanthine phosphoribosyltransferase | VIS19158_04541 | Not Available | Positive | 477423 - 477953 | 20045.2 |
| putative carbonic anhydrase | VIS19158_04546 | Not Available | Negative | 478053 - 478721 | 25172.0 |
| hypothetical protein | VIS19158_04551 | Not Available | Positive | 478967 - 480640 | 59305.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
