Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VIS19158_07892 | Not Available | Positive | 333741 - 334001 | 10055.1 |
| hypothetical protein | VIS19158_07897 | Not Available | Positive | 334069 - 334383 | 11852.8 |
| l-aspartate oxidase | VIS19158_07902 | Not Available | Negative | 334420 - 336036 | 60058.0 |
| rna polymerase sigma factor rpoe | VIS19158_07907 | Not Available | Positive | 336351 - 336929 | 21826.0 |
| sigma factor rpoe negative regulatory protein rsea | VIS19158_07912 | Not Available | Positive | 336952 - 337572 | 22531.4 |
| periplasmic negative regulator of sigmae | VIS19158_07917 | Not Available | Positive | 337569 - 338549 | 36901.4 |
| positive regulator of sigma e activity | VIS19158_07922 | Not Available | Positive | 338546 - 339016 | 16475.6 |
| gtp-binding protein lepa | VIS19158_07927 | Not Available | Positive | 339131 - 340924 | 65874.5 |
| signal peptidase i | VIS19158_07932 | Not Available | Positive | 341015 - 341911 | 33788.9 |
| ribonuclease iii | VIS19158_07937 | Not Available | Positive | 341927 - 342604 | 24836.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
