Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenine phosphoribosyltransferase | VIS19158_20921 | Not Available | Negative | 4740893 - 4741438 | 19652.8 |
| hypothetical protein | VIS19158_20926 | Not Available | Negative | 4741588 - 4741857 | 10564.2 |
| hypothetical protein | VIS19158_20931 | Not Available | Negative | 4741996 - 4742130 | 5147.32 |
| response regulator | VIS19158_20936 | Not Available | Negative | 4742370 - 4743464 | 40547.2 |
| lysr family transcriptional regulator, transcriptional activator aphb | VIS19158_20941 | Not Available | Positive | 4743710 - 4744585 | 33112.8 |
| protein ydja | VIS19158_20946 | Not Available | Negative | 4744677 - 4745225 | 19705.9 |
| multifunctional fatty acid oxidation complex subunit alpha | VIS19158_20951 | Not Available | Negative | 4745373 - 4747487 | 77003.7 |
| 3-ketoacyl-coa thiolase | VIS19158_20956 | Not Available | Negative | 4747487 - 4748794 | 46254.1 |
| rna polymerase sigma factor | VIS19158_20961 | Not Available | Positive | 4749368 - 4749931 | 21999.2 |
| hypothetical protein | VIS19158_20966 | Not Available | Positive | 4749924 - 4750655 | 26787.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
