Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VIS19158_20571 | Not Available | Positive | 4666325 - 4667146 | 29887.1 |
| hypothetical protein | VIS19158_20576 | Not Available | Positive | 4667158 - 4667799 | 24130.8 |
| atp-dependent clp protease atp-binding subunit | VIS19158_20581 | Not Available | Negative | 4667885 - 4670155 | 83609.0 |
| atp-dependent clp protease adaptor protein clps | VIS19158_20586 | Not Available | Negative | 4670198 - 4670518 | 12306.7 |
| cold shock-like protein cspd | VIS19158_20591 | Not Available | Positive | 4670978 - 4671199 | 8021.41 |
| isocitrate dehydrogenase, nadp-dependent | VIS19158_20596 | Not Available | Negative | 4671284 - 4673509 | 79976.0 |
| ribosomal large subunit pseudouridine synthase e | VIS19158_20601 | Not Available | Positive | 4673801 - 4674493 | 26021.0 |
| hypothetical protein | VIS19158_20606 | Not Available | Positive | 4674684 - 4675079 | 14895.0 |
| putative suppressor for copper-sensitivity b precursor | VIS19158_20611 | Not Available | Positive | 4675239 - 4677296 | 75334.1 |
| thiol-disulfide isomerase and thioredoxin | VIS19158_20616 | Not Available | Positive | 4677298 - 4677813 | 19606.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
