Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrin-iii c-methyltransferase | VIS19158_22467 | Not Available | Negative | 4631771 - 4633018 | 46162.3 |
| uroporphyrinogen-iii synthase | VIS19158_22472 | Not Available | Negative | 4633029 - 4633763 | 27514.1 |
| porphobilinogen deaminase | VIS19158_22477 | Not Available | Negative | 4633769 - 4634707 | 34340.4 |
| adenylate cyclase | VIS19158_22482 | Not Available | Positive | 4635056 - 4637584 | 97837.6 |
| hypothetical protein | VIS19158_22487 | Not Available | Negative | 4637581 - 4637691 | 3964.75 |
| frataxin-like protein | VIS19158_22492 | Not Available | Negative | 4637682 - 4637996 | 12157.3 |
| hypothetical protein | VIS19158_22497 | Not Available | Positive | 4638072 - 4638194 | 4311.25 |
| diaminopimelate decarboxylase | VIS19158_22502 | Not Available | Positive | 4638251 - 4639504 | 45902.7 |
| hypothetical protein | VIS19158_22517 | Not Available | Positive | 4640361 - 4641065 | 26432.4 |
| site-specific tyrosine recombinase xerc | VIS19158_22522 | Not Available | Positive | 4641037 - 4641957 | 34762.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
