Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion protein, vc_a0107 family | VIS19158_07070 | Not Available | Negative | 4298675 - 4299181 | 18483.9 |
| hypothetical protein | VIS19158_07075 | Not Available | Negative | 4299508 - 4300512 | 38581.7 |
| atp-dependent rna helicase | VIS19158_07080 | Not Available | Negative | 4301365 - 4302624 | 46753.3 |
| hypothetical protein | VIS19158_07085 | Not Available | Negative | 4302683 - 4303270 | 22915.2 |
| hypothetical protein | VIS19158_07090 | Not Available | Negative | 4303386 - 4303502 | 4379.9 |
| tyrosine-specific transport protein | VIS19158_07095 | Not Available | Positive | 4303828 - 4305024 | 42019.8 |
| hypothetical protein | VIS19158_07100 | Not Available | Positive | 4305329 - 4307218 | 71249.5 |
| dna polymerase iii subunit epsilon | VIS19158_07105 | Not Available | Positive | 4307226 - 4307945 | 27583.1 |
| bcct family transporter | VIS19158_07110 | Not Available | Negative | 4308084 - 4309655 | 56718.1 |
| marr family transcriptional regulator | VIS19158_07115 | Not Available | Positive | 4309994 - 4310470 | 18115.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
