Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-54 dependent transcriptional regulator | VIS19158_07020 | Not Available | Negative | 4285634 - 4287217 | 59567.5 |
| clpb protein | VIS19158_07025 | Not Available | Negative | 4287220 - 4289862 | 98190.8 |
| type iv / vi secretion system protein, dotu family | VIS19158_07030 | Not Available | Negative | 4289886 - 4290659 | 29687.6 |
| type vi secretion protein, vc_a0114 family | VIS19158_07035 | Not Available | Negative | 4290662 - 4291996 | 50218.4 |
| putative lipoprotein | VIS19158_07040 | Not Available | Negative | 4292001 - 4292480 | 18198.6 |
| hypothetical protein | VIS19158_07045 | Not Available | Negative | 4292483 - 4293955 | 55161.3 |
| hypothetical protein | VIS19158_07050 | Not Available | Negative | 4293959 - 4294936 | 37122.7 |
| hypothetical protein | VIS19158_07055 | Not Available | Negative | 4294939 - 4296708 | 67501.3 |
| type vi secretion system lysozyme-related protein | VIS19158_07060 | Not Available | Negative | 4296715 - 4297152 | 16408.8 |
| type vi secretion protein, evpb/vc_a0108 family | VIS19158_07065 | Not Available | Negative | 4297155 - 4298633 | 55544.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
