Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramic acid-6-phosphate etherase | VIS19158_08528 | Not Available | Negative | 4106097 - 4107011 | 32128.0 |
| transcriptional regulator | VIS19158_08533 | Not Available | Positive | 4107258 - 4108103 | 30386.7 |
| dna ligase | VIS19158_08538 | Not Available | Negative | 4108111 - 4108977 | 32929.5 |
| putative anti-sigma regulatory factor | VIS19158_08543 | Not Available | Positive | 4109241 - 4109561 | 11943.3 |
| outer membrane protein | VIS19158_08548 | Not Available | Positive | 4109580 - 4110416 | 31174.2 |
| periplasmic protein involved in polysaccharide export | VIS19158_08553 | Not Available | Positive | 4110403 - 4112514 | 77027.7 |
| putative capsular polysaccharide biosynthesis protein | VIS19158_08558 | Not Available | Positive | 4112514 - 4113206 | 26106.6 |
| signal transduction histidine kinase | VIS19158_08563 | Not Available | Positive | 4113227 - 4115530 | 85376.2 |
| putative luxo repressor protein | VIS19158_08568 | Not Available | Positive | 4115566 - 4117035 | 54890.8 |
| putative glycosyltransferase | VIS19158_08573 | Not Available | Positive | 4117013 - 4118080 | 39426.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
