Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional activator gcva | VIS19158_21281 | Not Available | Negative | 4010019 - 4010933 | 34166.8 |
| hypothetical protein | VIS19158_21286 | Not Available | Negative | 4011125 - 4011310 | 7201.55 |
| hypothetical protein | VIS19158_21291 | Not Available | Negative | 4011397 - 4011495 | 3492.29 |
| thiamine biosynthesis protein thii | VIS19158_21296 | Not Available | Negative | 4011789 - 4013237 | 54499.5 |
| flagellar motor protein motb | VIS19158_21301 | Not Available | Negative | 4013400 - 4014347 | 35384.1 |
| flagellar motor protein poma | VIS19158_21306 | Not Available | Negative | 4014360 - 4015121 | 27195.6 |
| putative exodeoxyribonuclease vii small subunit | VIS19158_21311 | Not Available | Positive | 4015419 - 4015661 | 8826.15 |
| geranylgeranyl pyrophosphate synthase | VIS19158_21316 | Not Available | Positive | 4015682 - 4016566 | 32456.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | VIS19158_21321 | Not Available | Positive | 4016587 - 4018452 | 67988.1 |
| carbohydrate binding domain protein | VIS19158_21326 | Not Available | Negative | 4018535 - 4021507 | 112606.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
