Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | VIS19158_21231 | Not Available | Negative | 3999029 - 3999805 | 29436.1 |
| secy interacting protein syd | VIS19158_21236 | Not Available | Negative | 3999808 - 4000353 | 20468.9 |
| 7-cyano-7-deazaguanine reductase | VIS19158_21241 | Not Available | Positive | 4000431 - 4001276 | 32042.6 |
| tpr-repeat-containing protein | VIS19158_21246 | Not Available | Positive | 4001291 - 4003561 | 86659.2 |
| ggdef family protein | VIS19158_21251 | Not Available | Positive | 4003674 - 4005239 | 59267.0 |
| rossmann fold nucleotide-binding protein | VIS19158_21256 | Not Available | Positive | 4005521 - 4006888 | 50930.4 |
| exonuclease ix | VIS19158_21261 | Not Available | Positive | 4006983 - 4007762 | 29397.2 |
| putative rna 2'-o-ribose methyltransferase | VIS19158_21266 | Not Available | Negative | 4007908 - 4008999 | 41647.6 |
| hypothetical protein | VIS19158_21271 | Not Available | Negative | 4009000 - 4009395 | 13887.5 |
| alpha/beta hydrolase | VIS19158_21276 | Not Available | Negative | 4009397 - 4010029 | 23219.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
