Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hhe/ggdef domain protein | VIS19158_21641 | Not Available | Negative | 3497093 - 3498232 | 43224.4 |
| Trna-met | Not Available | Not Available | Positive | 3498408 - 3498483 | Not Available |
| rna polymerase sigma factor rpod | VIS19158_21646 | Not Available | Negative | 3498627 - 3500483 | 70269.9 |
| dna primase | VIS19158_21651 | Not Available | Negative | 3500582 - 3502345 | 66700.2 |
| hypothetical protein | VIS19158_21656 | Not Available | Negative | 3502492 - 3502935 | 15994.5 |
| 30s ribosomal protein s21 | VIS19158_21661 | Not Available | Negative | 3502961 - 3503176 | 8487.44 |
| hypothetical protein | VIS19158_21666 | Not Available | Negative | 3503196 - 3503306 | 4118.98 |
| putative dna-binding/iron metalloprotein/ap endonuclease | VIS19158_21671 | Not Available | Positive | 3503656 - 3504672 | 36124.8 |
| hypothetical protein | VIS19158_21676 | Not Available | Positive | 3504810 - 3505637 | 30540.8 |
| putative glycerol-3-phosphate acyltransferase plsy | VIS19158_21681 | Not Available | Negative | 3505727 - 3506323 | 21426.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
