Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Vibrio
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Vibrio |
| Species | Vibrio scophthalmi |
| Strain | LMG 19158 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1333750 bp
Thymine Count
1356093 bp
Guanine Count
1100464 bp
Cytosine Count
1063981 bp
Genome Length
4854288 bp
Protein-coding Genes
4515 genes
Non-Coding Genes
142 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adenosylcobinamide-phosphate synthase | VIS19158_09198 | Not Available | Negative | 3467156 - 3468109 | 35120.9 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | VIS19158_09203 | Not Available | Negative | 3468122 - 3468820 | 24890.0 |
| 30s ribosomal protein s15 | VIS19158_09208 | Not Available | Positive | 3469057 - 3469326 | 9994.12 |
| polynucleotide phosphorylase/polyadenylase | VIS19158_09213 | Not Available | Positive | 3469630 - 3471765 | 76646.1 |
| lipoprotein nlpi | VIS19158_09218 | Not Available | Positive | 3471985 - 3472893 | 34668.1 |
| transcriptional regulator marr family protein | VIS19158_09223 | Not Available | Positive | 3473002 - 3473415 | 15813.2 |
| multidrug efflux pump vmra | VIS19158_09228 | Not Available | Positive | 3473482 - 3474822 | 48467.7 |
| hypothetical protein | VIS19158_09233 | Not Available | Negative | 3474875 - 3475750 | 32888.3 |
| putative protease | VIS19158_09238 | Not Available | Negative | 3475769 - 3476782 | 37312.1 |
| pas/ggdef domain-containing protein | VIS19158_09243 | Not Available | Negative | 3476927 - 3478969 | 76934.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
